Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 WWOX-216ENST00000569818 525 ntBASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 CR769767.2-201ENST00000622735 460 ntBASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN1Q9UMX0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 AP000523.1-201ENST00000398242 1049 ntBASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 MCCD1P1-208ENST00000445732 328 ntBASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 YBX1P2-201ENST00000489612 999 ntBASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 AL031432.5-201ENST00000641059 760 ntBASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.34■□□□□ 0.85
UBQLN1Q9UMX0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 AC009947.2-201ENST00000444014 672 ntBASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 NEK4P2-201ENST00000580004 1012 ntBASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.33■□□□□ 0.85
UBQLN1Q9UMX0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UBQLN1Q9UMX0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBQLN1Q9UMX0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBQLN1Q9UMX0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UBQLN1Q9UMX0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.33■□□□□ 0.84
UBQLN1Q9UMX0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBQLN1Q9UMX0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBQLN1Q9UMX0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 AL512353.2-201ENST00000448759 1962 ntBASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 RNF152P1-201ENST00000397754 604 ntBASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 AC005332.7-201ENST00000614046 2005 ntBASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
UBQLN1Q9UMX0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBQLN1Q9UMX0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBQLN1Q9UMX0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBQLN1Q9UMX0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBQLN1Q9UMX0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms