Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 AC106739.1-201ENST00000617035 715 ntBASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD3Q9UBI1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 AC096631.2-201ENST00000436136 790 ntBASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 MFSD11-216ENST00000590393 1141 ntBASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD3Q9UBI1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 AC009053.2-201ENST00000563701 2365 ntBASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 AC126763.1-201ENST00000552015 2118 ntBASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 AL136967.2-201ENST00000623968 743 ntBASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 LINC00896-202ENST00000609602 2128 ntBASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD3Q9UBI1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
COMMD3Q9UBI1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms