Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.35■□□□□ 0.53
NDE1Q9NXR1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 CYP2T3P-201ENST00000601990 817 ntBASIC18.35■□□□□ 0.53
NDE1Q9NXR1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 AC073592.3-201ENST00000625118 1834 ntBASIC18.35■□□□□ 0.53
NDE1Q9NXR1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 SDHAP1-207ENST00000440850 2000 ntBASIC18.34■□□□□ 0.53
NDE1Q9NXR1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 AC008764.6-201ENST00000595909 2069 ntBASIC18.34■□□□□ 0.53
NDE1Q9NXR1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDE1Q9NXR1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.33■□□□□ 0.53
NDE1Q9NXR1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDE1Q9NXR1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDE1Q9NXR1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDE1Q9NXR1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NDE1Q9NXR1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
NDE1Q9NXR1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NDE1Q9NXR1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NDE1Q9NXR1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 AL589743.5-201ENST00000616611 1050 ntBASIC18.33■□□□□ 0.52
NDE1Q9NXR1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NDE1Q9NXR1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NDE1Q9NXR1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms