Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB16Q9NRJ7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 AC097658.1-201ENST00000475555 843 ntBASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 AC091874.3-201ENST00000512672 1195 ntBASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB16Q9NRJ7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.46■□□□□ 0.22
PCDHB16Q9NRJ7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHB16Q9NRJ7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.46■□□□□ 0.22
PCDHB16Q9NRJ7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHB16Q9NRJ7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 AC006557.6-201ENST00000623071 864 ntBASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 HLA-B-256ENST00000639848 1089 ntBASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 AL138781.2-201ENST00000617896 1843 ntBASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCDHB16Q9NRJ7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHB16Q9NRJ7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms