Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.61■□□□□ 0.41
POLE3Q9NRF9 CROCCP3-202ENST00000420820 1947 ntBASIC17.6■□□□□ 0.41
POLE3Q9NRF9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 NFIC-211ENST00000641145 8399 ntBASIC17.6■□□□□ 0.41
POLE3Q9NRF9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 KRT18P29-201ENST00000397031 1267 ntBASIC17.6■□□□□ 0.41
POLE3Q9NRF9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 AC083906.6-201ENST00000641366 219 ntBASIC17.6■□□□□ 0.41
POLE3Q9NRF9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 KRT16P1-201ENST00000399124 1418 ntBASIC17.6■□□□□ 0.41
POLE3Q9NRF9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLE3Q9NRF9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 AL138781.2-201ENST00000617896 1843 ntBASIC17.59■□□□□ 0.41
POLE3Q9NRF9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 AL135905.2-201ENST00000584934 1404 ntBASIC17.59■□□□□ 0.41
POLE3Q9NRF9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 AC073195.1-201ENST00000607241 877 ntBASIC17.59■□□□□ 0.41
POLE3Q9NRF9 AL359736.2-201ENST00000621992 437 ntBASIC17.59■□□□□ 0.41
POLE3Q9NRF9 AL031985.4-201ENST00000642138 673 ntBASIC17.59■□□□□ 0.41
POLE3Q9NRF9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 AC093503.3-201ENST00000624917 2352 ntBASIC17.59■□□□□ 0.41
POLE3Q9NRF9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
POLE3Q9NRF9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
POLE3Q9NRF9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
POLE3Q9NRF9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLE3Q9NRF9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLE3Q9NRF9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms