Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.61■□□□□ 0.73
HPS4Q9NQG7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 ZNF815P-204ENST00000434898 1737 ntBASIC19.6■□□□□ 0.73
HPS4Q9NQG7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 AC112907.2-201ENST00000448639 330 ntBASIC19.6■□□□□ 0.73
HPS4Q9NQG7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.6■□□□□ 0.73
HPS4Q9NQG7 AC083849.1-201ENST00000615227 514 ntBASIC19.6■□□□□ 0.73
HPS4Q9NQG7 HYMAI.1-201ENST00000620949 238 ntBASIC19.6■□□□□ 0.73
HPS4Q9NQG7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HPS4Q9NQG7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 TCF3P1-201ENST00000423021 1937 ntBASIC19.59■□□□□ 0.73
HPS4Q9NQG7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 TSPY23P-201ENST00000440136 739 ntBASIC19.59■□□□□ 0.73
HPS4Q9NQG7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 AC093458.2-201ENST00000623150 629 ntBASIC19.59■□□□□ 0.73
HPS4Q9NQG7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
HPS4Q9NQG7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HPS4Q9NQG7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
HPS4Q9NQG7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.58■□□□□ 0.73
HPS4Q9NQG7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HPS4Q9NQG7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
HPS4Q9NQG7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.58■□□□□ 0.73
HPS4Q9NQG7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HPS4Q9NQG7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HPS4Q9NQG7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HPS4Q9NQG7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 STARP1-201ENST00000397973 869 ntBASIC19.58■□□□□ 0.72
HPS4Q9NQG7 SPDYE15P-201ENST00000424157 909 ntBASIC19.58■□□□□ 0.72
HPS4Q9NQG7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 AL136038.3-201ENST00000561909 1096 ntBASIC19.58■□□□□ 0.72
HPS4Q9NQG7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 CR769767.2-201ENST00000622735 460 ntBASIC19.58■□□□□ 0.72
HPS4Q9NQG7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HPS4Q9NQG7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS4Q9NQG7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms