Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 AC096582.2-201ENST00000510860 516 ntBASIC17.65■□□□□ 0.42
CHD8Q9HCK8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 AF228730.6-201ENST00000641497 218 ntBASIC17.65■□□□□ 0.42
CHD8Q9HCK8 AC084121.3-201ENST00000641716 218 ntBASIC17.65■□□□□ 0.42
CHD8Q9HCK8 AC105233.6-201ENST00000642093 218 ntBASIC17.65■□□□□ 0.42
CHD8Q9HCK8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD8Q9HCK8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHD8Q9HCK8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHD8Q9HCK8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHD8Q9HCK8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.64■□□□□ 0.41
CHD8Q9HCK8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.63■□□□□ 0.41
CHD8Q9HCK8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 AC124864.1-201ENST00000623408 392 ntBASIC17.63■□□□□ 0.41
CHD8Q9HCK8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 MIR5100-201ENST00000579544 119 ntBASIC17.63■□□□□ 0.41
CHD8Q9HCK8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD8Q9HCK8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 AC114341.1-201ENST00000618070 349 ntBASIC17.62■□□□□ 0.41
CHD8Q9HCK8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 IGHGP-201ENST00000390555 1178 ntBASIC17.62■□□□□ 0.41
CHD8Q9HCK8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 PAWRP1-201ENST00000451083 565 ntBASIC17.62■□□□□ 0.41
CHD8Q9HCK8 YBX1P5-201ENST00000509441 847 ntBASIC17.62■□□□□ 0.41
CHD8Q9HCK8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 Z83851.2-201ENST00000609564 659 ntBASIC17.62■□□□□ 0.41
CHD8Q9HCK8 AP001269.4-201ENST00000609611 512 ntBASIC17.62■□□□□ 0.41
CHD8Q9HCK8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.62■□□□□ 0.41
CHD8Q9HCK8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 KRT8P3-201ENST00000519669 1449 ntBASIC17.61■□□□□ 0.41
CHD8Q9HCK8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms