Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 AC073195.1-201ENST00000607241 877 ntBASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 Z98044.1-201ENST00000632503 1764 ntBASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 KRT8P11-201ENST00000409686 1436 ntBASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 RCC2P6-201ENST00000526625 1557 ntBASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 PRORSD1P-201ENST00000295112 541 ntBASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 PRSS44-201ENST00000515154 1146 ntBASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 CR392000.1-201ENST00000624770 1228 ntBASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 AL031985.4-201ENST00000642138 673 ntBASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC40Q9H9A6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 AC004951.3-201ENST00000418645 1148 ntBASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 AL135905.2-201ENST00000584934 1404 ntBASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC40Q9H9A6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 AL512353.2-201ENST00000448759 1962 ntBASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 AC091390.4-202ENST00000476426 537 ntBASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms