Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SCAF1Q9H7N4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
SCAF1Q9H7N4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.11
SCAF1Q9H7N4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC28.2■■■□□ 2.1
SCAF1Q9H7N4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC28.2■■■□□ 2.1
SCAF1Q9H7N4 AC120498.9-201ENST00000339021 3867 ntBASIC28.2■■■□□ 2.1
SCAF1Q9H7N4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
SCAF1Q9H7N4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC28.2■■■□□ 2.1
SCAF1Q9H7N4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC28.2■■■□□ 2.1
SCAF1Q9H7N4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SCAF1Q9H7N4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SCAF1Q9H7N4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC28.2■■■□□ 2.1
SCAF1Q9H7N4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 FDX1P1-201ENST00000449115 551 ntBASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 PNN-205ENST00000556530 601 ntTSL 2 BASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 TCF3P1-201ENST00000423021 1937 ntBASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
SCAF1Q9H7N4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 AC026790.2-201ENST00000606282 430 ntBASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 NIFKP9-201ENST00000419265 221 ntBASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC28.18■■■□□ 2.1
SCAF1Q9H7N4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC28.17■■■□□ 2.1
SCAF1Q9H7N4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 AC116050.2-201ENST00000612102 1779 ntBASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SCAF1Q9H7N4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SCAF1Q9H7N4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC28.15■■■□□ 2.1
SCAF1Q9H7N4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC28.15■■■□□ 2.1
SCAF1Q9H7N4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SCAF1Q9H7N4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
SCAF1Q9H7N4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC28.15■■■□□ 2.1
SCAF1Q9H7N4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
SCAF1Q9H7N4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
SCAF1Q9H7N4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SCAF1Q9H7N4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SCAF1Q9H7N4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms