Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.37■■□□□ 1.17
RNF41Q9H4P4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
RNF41Q9H4P4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF41Q9H4P4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RNF41Q9H4P4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 ECEL1P3-201ENST00000427961 737 ntBASIC22.36■■□□□ 1.17
RNF41Q9H4P4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.36■■□□□ 1.17
RNF41Q9H4P4 ECEL1P2-202ENST00000465689 757 ntBASIC22.36■■□□□ 1.17
RNF41Q9H4P4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 FAM87A-204ENST00000613235 858 ntBASIC22.36■■□□□ 1.17
RNF41Q9H4P4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF41Q9H4P4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 HMGA1P5-201ENST00000412453 271 ntBASIC22.35■■□□□ 1.17
RNF41Q9H4P4 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 AC008622.2-201ENST00000617006 1229 ntBASIC22.35■■□□□ 1.17
RNF41Q9H4P4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF41Q9H4P4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 AL512353.2-201ENST00000448759 1962 ntBASIC22.34■■□□□ 1.17
RNF41Q9H4P4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF41Q9H4P4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 AC005363.2-201ENST00000618631 242 ntBASIC22.33■■□□□ 1.17
RNF41Q9H4P4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF41Q9H4P4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF41Q9H4P4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RNF41Q9H4P4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF41Q9H4P4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF41Q9H4P4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
RNF41Q9H4P4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF41Q9H4P4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
RNF41Q9H4P4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF41Q9H4P4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
RNF41Q9H4P4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF41Q9H4P4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF41Q9H4P4 AL049812.1-201ENST00000432563 2267 ntBASIC22.32■■□□□ 1.16
RNF41Q9H4P4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF41Q9H4P4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF41Q9H4P4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
RNF41Q9H4P4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF41Q9H4P4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF41Q9H4P4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
RNF41Q9H4P4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
RNF41Q9H4P4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF41Q9H4P4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms