Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 B3GAT3P1-201ENST00000471720 806 ntBASIC23.92■■□□□ 1.42
CHMP4BQ9H444 CD177P1-201ENST00000606252 935 ntBASIC23.92■■□□□ 1.42
CHMP4BQ9H444 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHMP4BQ9H444 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 RPS2P55-201ENST00000397318 883 ntBASIC23.91■■□□□ 1.42
CHMP4BQ9H444 AC098590.1-201ENST00000468126 897 ntBASIC23.91■■□□□ 1.42
CHMP4BQ9H444 AC107956.1-201ENST00000494359 873 ntBASIC23.91■■□□□ 1.42
CHMP4BQ9H444 CKBP1-201ENST00000565489 1086 ntBASIC23.91■■□□□ 1.42
CHMP4BQ9H444 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.91■■□□□ 1.42
CHMP4BQ9H444 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 AL158047.1-201ENST00000445918 881 ntBASIC23.9■■□□□ 1.42
CHMP4BQ9H444 AP000692.2-201ENST00000608391 879 ntBASIC23.9■■□□□ 1.42
CHMP4BQ9H444 DGCR10-201ENST00000609839 495 ntBASIC23.9■■□□□ 1.42
CHMP4BQ9H444 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHMP4BQ9H444 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.89■■□□□ 1.42
CHMP4BQ9H444 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
CHMP4BQ9H444 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CHMP4BQ9H444 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
CHMP4BQ9H444 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CHMP4BQ9H444 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CHMP4BQ9H444 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 FAM197Y1-201ENST00000421178 764 ntBASIC23.89■■□□□ 1.41
CHMP4BQ9H444 AC011506.1-201ENST00000474329 610 ntBASIC23.89■■□□□ 1.41
CHMP4BQ9H444 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 AC233702.5-201ENST00000584107 538 ntBASIC23.89■■□□□ 1.41
CHMP4BQ9H444 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.89■■□□□ 1.41
CHMP4BQ9H444 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms