Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.58■□□□□ 0.4
UBQLN3Q9H347 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN3Q9H347 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBQLN3Q9H347 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 CROCCP3-202ENST00000420820 1947 ntBASIC17.57■□□□□ 0.4
UBQLN3Q9H347 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 MMP23A-201ENST00000234610 1017 ntBASIC17.57■□□□□ 0.4
UBQLN3Q9H347 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 AC211429.1-201ENST00000415277 523 ntBASIC17.57■□□□□ 0.4
UBQLN3Q9H347 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 FITM1-202ENST00000559294 800 ntBASIC17.57■□□□□ 0.4
UBQLN3Q9H347 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 AL160286.2-201ENST00000567150 934 ntBASIC17.57■□□□□ 0.4
UBQLN3Q9H347 AC130371.2-201ENST00000619443 611 ntBASIC17.57■□□□□ 0.4
UBQLN3Q9H347 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 TEX21P-204ENST00000641479 1693 ntBASIC17.57■□□□□ 0.4
UBQLN3Q9H347 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBQLN3Q9H347 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 AL049812.1-201ENST00000432563 2267 ntBASIC17.56■□□□□ 0.4
UBQLN3Q9H347 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 AC012306.2-201ENST00000609350 630 ntBASIC17.56■□□□□ 0.4
UBQLN3Q9H347 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
UBQLN3Q9H347 ZNF815P-204ENST00000434898 1737 ntBASIC17.55■□□□□ 0.4
UBQLN3Q9H347 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.55■□□□□ 0.4
UBQLN3Q9H347 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 AC097493.4-201ENST00000641197 219 ntBASIC17.55■□□□□ 0.4
UBQLN3Q9H347 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBQLN3Q9H347 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms