Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS11Q9H270 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.08■□□□□ 0.64
VPS11Q9H270 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.08■□□□□ 0.64
VPS11Q9H270 TSPY6P-201ENST00000448518 926 ntBASIC19.08■□□□□ 0.64
VPS11Q9H270 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.08■□□□□ 0.64
VPS11Q9H270 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.08■□□□□ 0.64
VPS11Q9H270 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS11Q9H270 PNMA6B-201ENST00000538162 1200 ntBASIC19.08■□□□□ 0.64
VPS11Q9H270 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.08■□□□□ 0.64
VPS11Q9H270 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.08■□□□□ 0.64
VPS11Q9H270 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.08■□□□□ 0.64
VPS11Q9H270 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS11Q9H270 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS11Q9H270 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS11Q9H270 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS11Q9H270 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
VPS11Q9H270 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS11Q9H270 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS11Q9H270 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS11Q9H270 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS11Q9H270 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS11Q9H270 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS11Q9H270 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VPS11Q9H270 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.07■□□□□ 0.64
VPS11Q9H270 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VPS11Q9H270 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VPS11Q9H270 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 AC020916.1-201ENST00000587762 1774 ntBASIC19.07■□□□□ 0.64
VPS11Q9H270 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 TUBB8P6-201ENST00000436895 1288 ntBASIC19.07■□□□□ 0.64
VPS11Q9H270 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS11Q9H270 KRT18P16-201ENST00000510337 1294 ntBASIC19.07■□□□□ 0.64
VPS11Q9H270 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.07■□□□□ 0.64
VPS11Q9H270 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VPS11Q9H270 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.07■□□□□ 0.64
VPS11Q9H270 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS11Q9H270 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS11Q9H270 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.06■□□□□ 0.64
VPS11Q9H270 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS11Q9H270 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS11Q9H270 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
VPS11Q9H270 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VPS11Q9H270 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
VPS11Q9H270 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS11Q9H270 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS11Q9H270 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.06■□□□□ 0.64
VPS11Q9H270 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.06■□□□□ 0.64
VPS11Q9H270 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.06■□□□□ 0.64
VPS11Q9H270 AC060766.5-201ENST00000590539 871 ntBASIC19.06■□□□□ 0.64
VPS11Q9H270 AC120498.8-201ENST00000614275 531 ntBASIC19.06■□□□□ 0.64
VPS11Q9H270 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.06■□□□□ 0.64
VPS11Q9H270 MYC-209ENST00000641252 345 ntBASIC19.06■□□□□ 0.64
VPS11Q9H270 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS11Q9H270 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.06■□□□□ 0.64
VPS11Q9H270 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS11Q9H270 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS11Q9H270 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VPS11Q9H270 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VPS11Q9H270 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS11Q9H270 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.05■□□□□ 0.64
VPS11Q9H270 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
VPS11Q9H270 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.05■□□□□ 0.64
VPS11Q9H270 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS11Q9H270 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS11Q9H270 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS11Q9H270 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 NCF1B-203ENST00000435988 1254 ntBASIC19.05■□□□□ 0.64
VPS11Q9H270 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.05■□□□□ 0.64
VPS11Q9H270 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.05■□□□□ 0.64
VPS11Q9H270 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS11Q9H270 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms