Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.54■□□□□ 0.88
CDT1Q9H211 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.54■□□□□ 0.88
CDT1Q9H211 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDT1Q9H211 AC009947.2-201ENST00000444014 672 ntBASIC20.54■□□□□ 0.88
CDT1Q9H211 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.54■□□□□ 0.88
CDT1Q9H211 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
CDT1Q9H211 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.54■□□□□ 0.88
CDT1Q9H211 AL049597.2-201ENST00000565575 961 ntBASIC20.54■□□□□ 0.88
CDT1Q9H211 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.54■□□□□ 0.88
CDT1Q9H211 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.54■□□□□ 0.88
CDT1Q9H211 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.54■□□□□ 0.88
CDT1Q9H211 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDT1Q9H211 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDT1Q9H211 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDT1Q9H211 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDT1Q9H211 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDT1Q9H211 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDT1Q9H211 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CDT1Q9H211 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CDT1Q9H211 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDT1Q9H211 MCCD1P1-208ENST00000445732 328 ntBASIC20.53■□□□□ 0.88
CDT1Q9H211 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDT1Q9H211 COX11P1-201ENST00000489116 835 ntBASIC20.53■□□□□ 0.88
CDT1Q9H211 YBX1P2-201ENST00000489612 999 ntBASIC20.53■□□□□ 0.88
CDT1Q9H211 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.53■□□□□ 0.88
CDT1Q9H211 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.53■□□□□ 0.88
CDT1Q9H211 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.53■□□□□ 0.88
CDT1Q9H211 WWOX-216ENST00000569818 525 ntBASIC20.53■□□□□ 0.88
CDT1Q9H211 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CDT1Q9H211 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDT1Q9H211 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.53■□□□□ 0.88
CDT1Q9H211 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDT1Q9H211 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDT1Q9H211 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.53■□□□□ 0.88
CDT1Q9H211 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDT1Q9H211 AL161938.1-201ENST00000569833 2180 ntBASIC20.53■□□□□ 0.88
CDT1Q9H211 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDT1Q9H211 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.53■□□□□ 0.88
CDT1Q9H211 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDT1Q9H211 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.53■□□□□ 0.88
CDT1Q9H211 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.53■□□□□ 0.88
CDT1Q9H211 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.53■□□□□ 0.88
CDT1Q9H211 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.53■□□□□ 0.88
CDT1Q9H211 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.52■□□□□ 0.88
CDT1Q9H211 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDT1Q9H211 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.52■□□□□ 0.88
CDT1Q9H211 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDT1Q9H211 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.52■□□□□ 0.88
CDT1Q9H211 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDT1Q9H211 AC036111.1-201ENST00000533973 1582 ntBASIC20.52■□□□□ 0.88
CDT1Q9H211 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.52■□□□□ 0.88
CDT1Q9H211 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDT1Q9H211 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDT1Q9H211 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDT1Q9H211 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.52■□□□□ 0.88
CDT1Q9H211 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDT1Q9H211 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDT1Q9H211 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDT1Q9H211 AK4P3-201ENST00000418260 669 ntBASIC20.52■□□□□ 0.88
CDT1Q9H211 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.52■□□□□ 0.88
CDT1Q9H211 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.52■□□□□ 0.88
CDT1Q9H211 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CDT1Q9H211 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDT1Q9H211 AL023973.1-201ENST00000624619 620 ntBASIC20.52■□□□□ 0.88
CDT1Q9H211 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDT1Q9H211 RCC2P3-201ENST00000418112 1537 ntBASIC20.52■□□□□ 0.87
CDT1Q9H211 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDT1Q9H211 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDT1Q9H211 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.51■□□□□ 0.87
CDT1Q9H211 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.51■□□□□ 0.87
CDT1Q9H211 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDT1Q9H211 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.51■□□□□ 0.87
CDT1Q9H211 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.51■□□□□ 0.87
CDT1Q9H211 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.51■□□□□ 0.87
CDT1Q9H211 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CDT1Q9H211 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.51■□□□□ 0.87
CDT1Q9H211 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CDT1Q9H211 AL049812.1-201ENST00000432563 2267 ntBASIC20.51■□□□□ 0.87
CDT1Q9H211 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDT1Q9H211 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDT1Q9H211 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
CDT1Q9H211 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDT1Q9H211 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDT1Q9H211 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDT1Q9H211 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDT1Q9H211 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CDT1Q9H211 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CDT1Q9H211 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.5■□□□□ 0.87
CDT1Q9H211 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms