Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 HTR7P1-202ENST00000624664 4411 ntBASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLR2J3Q9H1A7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 AL512353.2-201ENST00000448759 1962 ntBASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2J3Q9H1A7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 AC004264.1-201ENST00000608354 794 ntBASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 LETM1P2-201ENST00000597330 2178 ntBASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.53■□□□□ 0.4
POLR2J3Q9H1A7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 UNC93B5-201ENST00000530315 699 ntBASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 AC104771.1-201ENST00000603335 964 ntBASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 AC083906.6-201ENST00000641366 219 ntBASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2J3Q9H1A7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR2J3Q9H1A7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
POLR2J3Q9H1A7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR2J3Q9H1A7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR2J3Q9H1A7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR2J3Q9H1A7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.52■□□□□ 0.39
POLR2J3Q9H1A7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms