Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM2Q9C040 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM2Q9C040 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM2Q9C040 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM2Q9C040 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM2Q9C040 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM2Q9C040 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM2Q9C040 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 AC008550.1-201ENST00000511500 884 ntBASIC17.45■□□□□ 0.38
TRIM2Q9C040 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 AC124016.1-201ENST00000609552 612 ntBASIC17.45■□□□□ 0.38
TRIM2Q9C040 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM2Q9C040 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM2Q9C040 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM2Q9C040 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM2Q9C040 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM2Q9C040 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRIM2Q9C040 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM2Q9C040 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM2Q9C040 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.44■□□□□ 0.38
TRIM2Q9C040 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM2Q9C040 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM2Q9C040 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM2Q9C040 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM2Q9C040 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM2Q9C040 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM2Q9C040 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 TSPY23P-201ENST00000440136 739 ntBASIC17.43■□□□□ 0.38
TRIM2Q9C040 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms