Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
FOXP3Q9BZS1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.58■□□□□ 0.72
FOXP3Q9BZS1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
FOXP3Q9BZS1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.58■□□□□ 0.72
FOXP3Q9BZS1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 AL354751.1-201ENST00000412768 1863 ntBASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 MTDHP1-201ENST00000605323 784 ntBASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXP3Q9BZS1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXP3Q9BZS1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 AC120498.8-201ENST00000614275 531 ntBASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXP3Q9BZS1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXP3Q9BZS1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXP3Q9BZS1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXP3Q9BZS1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXP3Q9BZS1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
FOXP3Q9BZS1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.54■□□□□ 0.72
FOXP3Q9BZS1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXP3Q9BZS1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXP3Q9BZS1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
FOXP3Q9BZS1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms