Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC091076.1-201ENST00000610741 619 ntBASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 KRT8P41-201ENST00000533985 1514 ntBASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 SDHAP1-207ENST00000440850 2000 ntBASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 COX11P1-201ENST00000489116 835 ntBASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RPAP1Q9BWH6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 AL031133.1-201ENST00000406807 723 ntBASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 AC141257.4-201ENST00000634557 245 ntBASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 AC136944.6-201ENST00000634818 245 ntBASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 AL353719.1-201ENST00000566847 864 ntBASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 AL358472.4-201ENST00000633140 710 ntBASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPAP1Q9BWH6 AC141586.3-201ENST00000562166 1838 ntBASIC23■■□□□ 1.27
RPAP1Q9BWH6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
RPAP1Q9BWH6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RPAP1Q9BWH6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RPAP1Q9BWH6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23■■□□□ 1.27
RPAP1Q9BWH6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RPAP1Q9BWH6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC23■■□□□ 1.27
RPAP1Q9BWH6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RPAP1Q9BWH6 AC093503.3-201ENST00000624917 2352 ntBASIC23■■□□□ 1.27
RPAP1Q9BWH6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RPAP1Q9BWH6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23■■□□□ 1.27
RPAP1Q9BWH6 ANKRD20A18P-201ENST00000359341 492 ntBASIC23■■□□□ 1.27
RPAP1Q9BWH6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23■■□□□ 1.27
RPAP1Q9BWH6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23■■□□□ 1.27
RPAP1Q9BWH6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RPAP1Q9BWH6 AL512604.3-201ENST00000569583 964 ntBASIC23■■□□□ 1.27
RPAP1Q9BWH6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23■■□□□ 1.27
RPAP1Q9BWH6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC23■■□□□ 1.27
RPAP1Q9BWH6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RPAP1Q9BWH6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms