Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
USB1Q9BQ65 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
USB1Q9BQ65 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.9■□□□□ 0.3
USB1Q9BQ65 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
USB1Q9BQ65 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.9■□□□□ 0.3
USB1Q9BQ65 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.9■□□□□ 0.3
USB1Q9BQ65 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.9■□□□□ 0.3
USB1Q9BQ65 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
USB1Q9BQ65 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 AC005363.2-201ENST00000618631 242 ntBASIC16.9■□□□□ 0.3
USB1Q9BQ65 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
USB1Q9BQ65 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.9■□□□□ 0.3
USB1Q9BQ65 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
USB1Q9BQ65 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USB1Q9BQ65 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
USB1Q9BQ65 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.89■□□□□ 0.3
USB1Q9BQ65 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
USB1Q9BQ65 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
USB1Q9BQ65 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.89■□□□□ 0.3
USB1Q9BQ65 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USB1Q9BQ65 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USB1Q9BQ65 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USB1Q9BQ65 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 AC098818.2-201ENST00000564925 2320 ntBASIC16.89■□□□□ 0.29
USB1Q9BQ65 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USB1Q9BQ65 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USB1Q9BQ65 TSPY14P-201ENST00000303979 915 ntBASIC16.89■□□□□ 0.29
USB1Q9BQ65 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USB1Q9BQ65 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USB1Q9BQ65 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USB1Q9BQ65 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
USB1Q9BQ65 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USB1Q9BQ65 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USB1Q9BQ65 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USB1Q9BQ65 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USB1Q9BQ65 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USB1Q9BQ65 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USB1Q9BQ65 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USB1Q9BQ65 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USB1Q9BQ65 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
USB1Q9BQ65 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USB1Q9BQ65 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USB1Q9BQ65 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USB1Q9BQ65 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 BX323043.1-201ENST00000641006 1765 ntBASIC16.88■□□□□ 0.29
USB1Q9BQ65 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USB1Q9BQ65 CRYGFP-201ENST00000418459 633 ntBASIC16.88■□□□□ 0.29
USB1Q9BQ65 SLC25A1P2-201ENST00000430693 912 ntBASIC16.88■□□□□ 0.29
USB1Q9BQ65 CCR12P-201ENST00000446203 998 ntBASIC16.88■□□□□ 0.29
USB1Q9BQ65 CA15P1-201ENST00000481698 905 ntBASIC16.88■□□□□ 0.29
USB1Q9BQ65 Z85996.1-201ENST00000494644 937 ntBASIC16.88■□□□□ 0.29
USB1Q9BQ65 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 SLC25A1P4-201ENST00000567977 778 ntBASIC16.88■□□□□ 0.29
USB1Q9BQ65 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USB1Q9BQ65 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USB1Q9BQ65 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.88■□□□□ 0.29
USB1Q9BQ65 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USB1Q9BQ65 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms