Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.94■□□□□ 0.14
TIMD4Q96H15 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TIMD4Q96H15 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMD4Q96H15 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMD4Q96H15 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.93■□□□□ 0.14
TIMD4Q96H15 TREX1-205ENST00000625293 1783 ntBASIC15.93■□□□□ 0.14
TIMD4Q96H15 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMD4Q96H15 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMD4Q96H15 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.93■□□□□ 0.14
TIMD4Q96H15 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TIMD4Q96H15 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.93■□□□□ 0.14
TIMD4Q96H15 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.93■□□□□ 0.14
TIMD4Q96H15 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMD4Q96H15 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.93■□□□□ 0.14
TIMD4Q96H15 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.93■□□□□ 0.14
TIMD4Q96H15 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMD4Q96H15 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TIMD4Q96H15 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.93■□□□□ 0.14
TIMD4Q96H15 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TIMD4Q96H15 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TIMD4Q96H15 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMD4Q96H15 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TIMD4Q96H15 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMD4Q96H15 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMD4Q96H15 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TIMD4Q96H15 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.93■□□□□ 0.14
TIMD4Q96H15 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMD4Q96H15 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.92■□□□□ 0.14
TIMD4Q96H15 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMD4Q96H15 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.92■□□□□ 0.14
TIMD4Q96H15 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMD4Q96H15 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.92■□□□□ 0.14
TIMD4Q96H15 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.92■□□□□ 0.14
TIMD4Q96H15 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TIMD4Q96H15 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
TIMD4Q96H15 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMD4Q96H15 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.92■□□□□ 0.14
TIMD4Q96H15 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMD4Q96H15 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMD4Q96H15 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.92■□□□□ 0.14
TIMD4Q96H15 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TIMD4Q96H15 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.92■□□□□ 0.14
TIMD4Q96H15 HTR7P1-202ENST00000624664 4411 ntBASIC15.92■□□□□ 0.14
TIMD4Q96H15 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMD4Q96H15 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMD4Q96H15 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TIMD4Q96H15 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TIMD4Q96H15 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMD4Q96H15 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.92■□□□□ 0.14
TIMD4Q96H15 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.92■□□□□ 0.14
TIMD4Q96H15 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.92■□□□□ 0.14
TIMD4Q96H15 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TIMD4Q96H15 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TIMD4Q96H15 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.91■□□□□ 0.14
TIMD4Q96H15 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.91■□□□□ 0.14
TIMD4Q96H15 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.91■□□□□ 0.14
TIMD4Q96H15 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.91■□□□□ 0.14
TIMD4Q96H15 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 AK4P3-201ENST00000418260 669 ntBASIC15.91■□□□□ 0.14
TIMD4Q96H15 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.91■□□□□ 0.14
TIMD4Q96H15 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.91■□□□□ 0.14
TIMD4Q96H15 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 COX11P1-201ENST00000489116 835 ntBASIC15.91■□□□□ 0.14
TIMD4Q96H15 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.91■□□□□ 0.14
TIMD4Q96H15 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.91■□□□□ 0.14
TIMD4Q96H15 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.91■□□□□ 0.14
TIMD4Q96H15 AC140113.3-201ENST00000605663 199 ntBASIC15.91■□□□□ 0.14
TIMD4Q96H15 AC141257.4-201ENST00000634557 245 ntBASIC15.91■□□□□ 0.14
TIMD4Q96H15 AC136944.6-201ENST00000634818 245 ntBASIC15.91■□□□□ 0.14
TIMD4Q96H15 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.91■□□□□ 0.14
TIMD4Q96H15 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TIMD4Q96H15 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms