Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 AC008622.2-201ENST00000617006 1229 ntBASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTHRC1Q96CG8 AL031598.1-201ENST00000561511 1773 ntBASIC17.58■□□□□ 0.41
CTHRC1Q96CG8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTHRC1Q96CG8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.58■□□□□ 0.41
CTHRC1Q96CG8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTHRC1Q96CG8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CTHRC1Q96CG8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTHRC1Q96CG8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CTHRC1Q96CG8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
CTHRC1Q96CG8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CTHRC1Q96CG8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.58■□□□□ 0.4
CTHRC1Q96CG8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.58■□□□□ 0.4
CTHRC1Q96CG8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTHRC1Q96CG8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.58■□□□□ 0.4
CTHRC1Q96CG8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTHRC1Q96CG8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTHRC1Q96CG8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
CTHRC1Q96CG8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.58■□□□□ 0.4
CTHRC1Q96CG8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CTHRC1Q96CG8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTHRC1Q96CG8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.58■□□□□ 0.4
CTHRC1Q96CG8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 MMP23A-201ENST00000234610 1017 ntBASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CTHRC1Q96CG8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 TSPY14P-201ENST00000303979 915 ntBASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 AL353719.1-201ENST00000566847 864 ntBASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 Z98044.1-201ENST00000632503 1764 ntBASIC17.56■□□□□ 0.4
CTHRC1Q96CG8 KRT8P9-201ENST00000558927 1449 ntBASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 AC092338.2-201ENST00000568827 1415 ntBASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 AL109659.2-201ENST00000606809 1674 ntBASIC17.55■□□□□ 0.4
CTHRC1Q96CG8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms