Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCAMP4Q969E2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCAMP4Q969E2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 AC010653.2-201ENST00000623505 997 ntBASIC18.83■□□□□ 0.6
SCAMP4Q969E2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCAMP4Q969E2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 TERF1P1-201ENST00000311003 1181 ntBASIC18.82■□□□□ 0.6
SCAMP4Q969E2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 AL137013.1-201ENST00000432946 1228 ntBASIC18.82■□□□□ 0.6
SCAMP4Q969E2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 KRT8P3-201ENST00000519669 1449 ntBASIC18.82■□□□□ 0.6
SCAMP4Q969E2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAMP4Q969E2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 HMGA1P5-201ENST00000412453 271 ntBASIC18.81■□□□□ 0.6
SCAMP4Q969E2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 KRT18P57-201ENST00000443599 1254 ntBASIC18.81■□□□□ 0.6
SCAMP4Q969E2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 MIR4674-201ENST00000582457 87 ntBASIC18.81■□□□□ 0.6
SCAMP4Q969E2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAMP4Q969E2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 RN7SL850P-201ENST00000579959 291 ntBASIC18.8■□□□□ 0.6
SCAMP4Q969E2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 AC073508.3-201ENST00000619697 1419 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms