Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.24■□□□□ 0.83
SHC3Q92529 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.24■□□□□ 0.83
SHC3Q92529 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.24■□□□□ 0.83
SHC3Q92529 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.24■□□□□ 0.83
SHC3Q92529 DGCR10-201ENST00000609839 495 ntBASIC20.24■□□□□ 0.83
SHC3Q92529 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHC3Q92529 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHC3Q92529 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHC3Q92529 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SHC3Q92529 AC120498.9-201ENST00000339021 3867 ntBASIC20.24■□□□□ 0.83
SHC3Q92529 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHC3Q92529 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.24■□□□□ 0.83
SHC3Q92529 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.24■□□□□ 0.83
SHC3Q92529 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SHC3Q92529 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.23■□□□□ 0.83
SHC3Q92529 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.23■□□□□ 0.83
SHC3Q92529 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SHC3Q92529 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.23■□□□□ 0.83
SHC3Q92529 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.23■□□□□ 0.83
SHC3Q92529 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.23■□□□□ 0.83
SHC3Q92529 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.23■□□□□ 0.83
SHC3Q92529 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.23■□□□□ 0.83
SHC3Q92529 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SHC3Q92529 AC068587.9-201ENST00000641814 219 ntBASIC20.23■□□□□ 0.83
SHC3Q92529 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
SHC3Q92529 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.23■□□□□ 0.83
SHC3Q92529 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.23■□□□□ 0.83
SHC3Q92529 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHC3Q92529 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.23■□□□□ 0.83
SHC3Q92529 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.22■□□□□ 0.83
SHC3Q92529 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.22■□□□□ 0.83
SHC3Q92529 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC3Q92529 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.22■□□□□ 0.83
SHC3Q92529 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.22■□□□□ 0.83
SHC3Q92529 ANO7L1-203ENST00000602586 1720 ntBASIC20.22■□□□□ 0.83
SHC3Q92529 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC3Q92529 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
SHC3Q92529 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHC3Q92529 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.22■□□□□ 0.83
SHC3Q92529 AC008550.1-201ENST00000511500 884 ntBASIC20.22■□□□□ 0.83
SHC3Q92529 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.22■□□□□ 0.83
SHC3Q92529 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.22■□□□□ 0.83
SHC3Q92529 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.22■□□□□ 0.83
SHC3Q92529 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.22■□□□□ 0.83
SHC3Q92529 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
SHC3Q92529 REXO1L10P-201ENST00000615707 1290 ntBASIC20.22■□□□□ 0.83
SHC3Q92529 REXO1L12P-201ENST00000622156 912 ntBASIC20.22■□□□□ 0.83
SHC3Q92529 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC3Q92529 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.22■□□□□ 0.83
SHC3Q92529 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SHC3Q92529 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.22■□□□□ 0.83
SHC3Q92529 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC3Q92529 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.22■□□□□ 0.83
SHC3Q92529 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC3Q92529 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHC3Q92529 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC3Q92529 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
SHC3Q92529 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC3Q92529 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.21■□□□□ 0.83
SHC3Q92529 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC3Q92529 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.21■□□□□ 0.83
SHC3Q92529 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC3Q92529 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SHC3Q92529 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHC3Q92529 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHC3Q92529 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHC3Q92529 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.21■□□□□ 0.83
SHC3Q92529 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHC3Q92529 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC3Q92529 MTMR9LP-203ENST00000426597 1545 ntBASIC20.21■□□□□ 0.83
SHC3Q92529 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
SHC3Q92529 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC3Q92529 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC3Q92529 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.21■□□□□ 0.83
SHC3Q92529 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHC3Q92529 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC3Q92529 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
SHC3Q92529 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.2■□□□□ 0.82
SHC3Q92529 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.2■□□□□ 0.82
SHC3Q92529 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SHC3Q92529 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SHC3Q92529 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SHC3Q92529 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SHC3Q92529 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC3Q92529 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms