Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 AL499627.1-201ENST00000569373 2188 ntBASIC17.15■□□□□ 0.34
APH1BQ8WW43 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1BQ8WW43 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.15■□□□□ 0.34
APH1BQ8WW43 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.14■□□□□ 0.34
APH1BQ8WW43 AC135776.1-201ENST00000319817 2481 ntBASIC17.14■□□□□ 0.34
APH1BQ8WW43 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
APH1BQ8WW43 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.14■□□□□ 0.33
APH1BQ8WW43 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
APH1BQ8WW43 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
APH1BQ8WW43 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 YBX1P10-201ENST00000444752 975 ntBASIC17.14■□□□□ 0.33
APH1BQ8WW43 AC137761.2-201ENST00000561729 223 ntBASIC17.14■□□□□ 0.33
APH1BQ8WW43 AC145350.3-201ENST00000569033 163 ntBASIC17.14■□□□□ 0.33
APH1BQ8WW43 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.14■□□□□ 0.33
APH1BQ8WW43 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
APH1BQ8WW43 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.14■□□□□ 0.33
APH1BQ8WW43 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
APH1BQ8WW43 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.14■□□□□ 0.33
APH1BQ8WW43 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 GNAS-203ENST00000306120 1878 ntBASIC17.14■□□□□ 0.33
APH1BQ8WW43 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1BQ8WW43 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
APH1BQ8WW43 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
APH1BQ8WW43 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.13■□□□□ 0.33
APH1BQ8WW43 PRORSD1P-202ENST00000563365 2154 ntBASIC17.13■□□□□ 0.33
APH1BQ8WW43 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
APH1BQ8WW43 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
APH1BQ8WW43 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
APH1BQ8WW43 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 AP006587.1-201ENST00000534129 1502 ntBASIC17.13■□□□□ 0.33
APH1BQ8WW43 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.13■□□□□ 0.33
APH1BQ8WW43 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
APH1BQ8WW43 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
APH1BQ8WW43 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.13■□□□□ 0.33
APH1BQ8WW43 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
APH1BQ8WW43 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
APH1BQ8WW43 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1BQ8WW43 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.12■□□□□ 0.33
APH1BQ8WW43 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 AC099398.1-201ENST00000567919 2776 ntBASIC17.12■□□□□ 0.33
APH1BQ8WW43 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
APH1BQ8WW43 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.12■□□□□ 0.33
APH1BQ8WW43 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.12■□□□□ 0.33
APH1BQ8WW43 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms