Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 MIR3180-5-201ENST00000583743 153 ntBASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 AC024243.1-201ENST00000609234 778 ntBASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.53■■□□□ 1.2
SH3RF3Q8TEJ3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 AP000550.4-202ENST00000639755 178 ntBASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 AC005332.1-201ENST00000577698 1310 ntBASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SH3RF3Q8TEJ3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
SH3RF3Q8TEJ3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 FEM1AP3-201ENST00000403722 1741 ntBASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH3RF3Q8TEJ3 AL512353.2-201ENST00000448759 1962 ntBASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 RCC2P3-201ENST00000418112 1537 ntBASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 AC007952.6-201ENST00000573168 2673 ntBASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 AC003957.1-201ENST00000625108 2673 ntBASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 AC141586.3-201ENST00000562166 1838 ntBASIC22.5■■□□□ 1.19
SH3RF3Q8TEJ3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.49■■□□□ 1.19
SH3RF3Q8TEJ3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms