Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 MIR6084-201ENST00000622012 110 ntBASIC14.18□□□□□ -0.14
NUP35Q8NFH5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 AC124067.4-201ENST00000519691 2379 ntBASIC14.18□□□□□ -0.14
NUP35Q8NFH5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP35Q8NFH5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 AC116351.2-201ENST00000606540 1585 ntBASIC14.17□□□□□ -0.14
NUP35Q8NFH5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 AC023632.3-201ENST00000521633 145 ntBASIC14.17□□□□□ -0.14
NUP35Q8NFH5 MFSD11-216ENST00000590393 1141 ntBASIC14.17□□□□□ -0.14
NUP35Q8NFH5 AL591742.1-201ENST00000604433 565 ntBASIC14.17□□□□□ -0.14
NUP35Q8NFH5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.17□□□□□ -0.14
NUP35Q8NFH5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP35Q8NFH5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NUP35Q8NFH5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP35Q8NFH5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NUP35Q8NFH5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.16□□□□□ -0.14
NUP35Q8NFH5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NUP35Q8NFH5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.16□□□□□ -0.14
NUP35Q8NFH5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NUP35Q8NFH5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms