Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 AL049812.1-201ENST00000432563 2267 ntBASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF439Q8NDP4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF439Q8NDP4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF439Q8NDP4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF439Q8NDP4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF439Q8NDP4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.71■□□□□ 0.1
ZNF439Q8NDP4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.71■□□□□ 0.1
ZNF439Q8NDP4 IRX1P1-201ENST00000438849 1838 ntBASIC15.71■□□□□ 0.1
ZNF439Q8NDP4 OR6D1P-202ENST00000641007 5290 ntBASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 FP475955.4-201ENST00000623131 1990 ntBASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms