Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 YBX1P1-201ENST00000445822 960 ntBASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 AC131281.2-201ENST00000520478 145 ntBASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 AL136162.1-201ENST00000607711 1078 ntBASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC197Q8NCU1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC197Q8NCU1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CCDC197Q8NCU1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC197Q8NCU1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC197Q8NCU1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC197Q8NCU1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC197Q8NCU1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC197Q8NCU1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC197Q8NCU1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC197Q8NCU1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC197Q8NCU1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC197Q8NCU1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 AC019069.1-201ENST00000610008 1333 ntBASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 SLC25A6P5-201ENST00000435663 894 ntBASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 AC104417.2-201ENST00000562989 1793 ntBASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC197Q8NCU1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 AC135279.3-201ENST00000610945 1311 ntBASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC197Q8NCU1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms