Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 REXO1L10P-201ENST00000615707 1290 ntBASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 MIR6786-201ENST00000616843 113 ntBASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 REXO1L12P-201ENST00000622156 912 ntBASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
C11orf42Q8N5U0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 AC116562.4-201ENST00000641316 2276 ntBASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 AL355355.2-201ENST00000442321 338 ntBASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 AC091390.4-202ENST00000476426 537 ntBASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 MIR4785-201ENST00000585005 73 ntBASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 FSCN1P1-201ENST00000568912 1481 ntBASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C11orf42Q8N5U0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 AL032819.2-201ENST00000624543 2162 ntBASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 AC005332.7-201ENST00000614046 2005 ntBASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 KRT17P2-201ENST00000300992 1314 ntBASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
C11orf42Q8N5U0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
C11orf42Q8N5U0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
C11orf42Q8N5U0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
C11orf42Q8N5U0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
C11orf42Q8N5U0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
C11orf42Q8N5U0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
C11orf42Q8N5U0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
C11orf42Q8N5U0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.77■□□□□ 0.11
C11orf42Q8N5U0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
C11orf42Q8N5U0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.77■□□□□ 0.11
C11orf42Q8N5U0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.77■□□□□ 0.11
C11orf42Q8N5U0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.76■□□□□ 0.11
C11orf42Q8N5U0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms