Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 ATP5G1P1-201ENST00000448724 379 ntBASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 DUX4L26-201ENST00000489078 1255 ntBASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 NTF6B-201ENST00000591913 560 ntBASIC19.89■□□□□ 0.77
CCDC33Q8N5R6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 SLC25A1P4-201ENST00000567977 778 ntBASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 AP005242.2-201ENST00000580065 1175 ntBASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC33Q8N5R6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 DGCR10-201ENST00000609839 495 ntBASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC33Q8N5R6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 INGX-201ENST00000359239 846 ntBASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 EGLN1P1-201ENST00000531623 762 ntBASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 HLA-A-209ENST00000638375 975 ntBASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC33Q8N5R6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms