Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC116Q8IYX3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 AC233702.5-201ENST00000584107 538 ntBASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 Z99916.2-201ENST00000604037 246 ntBASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 AP001412.1-201ENST00000608405 714 ntBASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 MIR6786-201ENST00000616843 113 ntBASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC116Q8IYX3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 AC012618.2-201ENST00000428058 849 ntBASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 AC113410.3-201ENST00000623366 203 ntBASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 AL049637.2-201ENST00000641778 930 ntBASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 CROCCP3-202ENST00000420820 1947 ntBASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC116Q8IYX3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 B3GAT3P1-201ENST00000471720 806 ntBASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 FSCN1P1-201ENST00000568912 1481 ntBASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC116Q8IYX3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC116Q8IYX3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms