Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 AC004408.2-201ENST00000623613 2777 ntBASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 AL355355.2-201ENST00000442321 338 ntBASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
CCDC65Q8IXS2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 AC093503.3-201ENST00000624917 2352 ntBASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 DGCR10-201ENST00000609839 495 ntBASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 CROCCP3-202ENST00000420820 1947 ntBASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC65Q8IXS2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 AC026471.5-201ENST00000615068 467 ntBASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC65Q8IXS2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.02■□□□□ 0.96
CCDC65Q8IXS2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms