Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.78■□□□□ 0.6
APLFQ8IW19 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.77■□□□□ 0.6
APLFQ8IW19 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APLFQ8IW19 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APLFQ8IW19 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APLFQ8IW19 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.77■□□□□ 0.6
APLFQ8IW19 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.77■□□□□ 0.6
APLFQ8IW19 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
APLFQ8IW19 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.77■□□□□ 0.6
APLFQ8IW19 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APLFQ8IW19 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
APLFQ8IW19 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
APLFQ8IW19 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
APLFQ8IW19 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APLFQ8IW19 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
APLFQ8IW19 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APLFQ8IW19 AC087499.1-201ENST00000418141 1075 ntBASIC18.77■□□□□ 0.6
APLFQ8IW19 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APLFQ8IW19 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.77■□□□□ 0.6
APLFQ8IW19 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APLFQ8IW19 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.77■□□□□ 0.6
APLFQ8IW19 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.77■□□□□ 0.6
APLFQ8IW19 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.77■□□□□ 0.6
APLFQ8IW19 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
APLFQ8IW19 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.77■□□□□ 0.6
APLFQ8IW19 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.77■□□□□ 0.6
APLFQ8IW19 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
APLFQ8IW19 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
APLFQ8IW19 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APLFQ8IW19 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
APLFQ8IW19 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
APLFQ8IW19 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
APLFQ8IW19 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.76■□□□□ 0.59
APLFQ8IW19 AC092720.2-201ENST00000602388 1665 ntBASIC18.76■□□□□ 0.59
APLFQ8IW19 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.76■□□□□ 0.59
APLFQ8IW19 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
APLFQ8IW19 AL354751.1-201ENST00000412768 1863 ntBASIC18.76■□□□□ 0.59
APLFQ8IW19 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
APLFQ8IW19 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.76■□□□□ 0.59
APLFQ8IW19 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.76■□□□□ 0.59
APLFQ8IW19 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.76■□□□□ 0.59
APLFQ8IW19 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.76■□□□□ 0.59
APLFQ8IW19 AC133561.5-201ENST00000635547 218 ntBASIC18.76■□□□□ 0.59
APLFQ8IW19 AC097493.4-201ENST00000641197 219 ntBASIC18.76■□□□□ 0.59
APLFQ8IW19 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
APLFQ8IW19 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.76■□□□□ 0.59
APLFQ8IW19 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
APLFQ8IW19 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
APLFQ8IW19 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.76■□□□□ 0.59
APLFQ8IW19 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.76■□□□□ 0.59
APLFQ8IW19 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APLFQ8IW19 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
APLFQ8IW19 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
APLFQ8IW19 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.75■□□□□ 0.59
APLFQ8IW19 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
APLFQ8IW19 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
APLFQ8IW19 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 KRT18P21-201ENST00000515767 1272 ntBASIC18.75■□□□□ 0.59
APLFQ8IW19 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.75■□□□□ 0.59
APLFQ8IW19 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.75■□□□□ 0.59
APLFQ8IW19 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.75■□□□□ 0.59
APLFQ8IW19 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.75■□□□□ 0.59
APLFQ8IW19 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
APLFQ8IW19 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APLFQ8IW19 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
APLFQ8IW19 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APLFQ8IW19 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms