Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00346Q8IVM7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 TSPY23P-201ENST00000440136 739 ntBASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 AC128676.1-201ENST00000454392 318 ntBASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 AC110285.5-201ENST00000611501 352 ntBASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00346Q8IVM7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 TSPY21P-201ENST00000433481 731 ntBASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 C1QBPP2-201ENST00000528754 825 ntBASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00346Q8IVM7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 KRT8P41-201ENST00000533985 1514 ntBASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 AC133681.1-201ENST00000465482 601 ntBASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00346Q8IVM7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms