Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NUDCD3Q8IVD9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 LTB4R2-202ENST00000528054 3092 ntBASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 BX276092.2-201ENST00000417668 665 ntBASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 RAP2CP1-201ENST00000605103 478 ntBASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.84■□□□□ 0.61
NUDCD3Q8IVD9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUDCD3Q8IVD9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUDCD3Q8IVD9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUDCD3Q8IVD9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUDCD3Q8IVD9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
NUDCD3Q8IVD9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NUDCD3Q8IVD9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUDCD3Q8IVD9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NUDCD3Q8IVD9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
NUDCD3Q8IVD9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.83■□□□□ 0.61
NUDCD3Q8IVD9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.83■□□□□ 0.61
NUDCD3Q8IVD9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.83■□□□□ 0.61
NUDCD3Q8IVD9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.83■□□□□ 0.6
NUDCD3Q8IVD9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 AL121906.2-201ENST00000621597 723 ntBASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NUDCD3Q8IVD9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD3Q8IVD9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NUDCD3Q8IVD9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NUDCD3Q8IVD9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms