Protein–RNA interactions for Protein: Q86YW5

TREML1, Trem-like transcript 1 protein, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML1Q86YW5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TREML1Q86YW5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TREML1Q86YW5 PRORSD1P-202ENST00000563365 2154 ntBASIC18.35■□□□□ 0.53
TREML1Q86YW5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREML1Q86YW5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TREML1Q86YW5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.35■□□□□ 0.53
TREML1Q86YW5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREML1Q86YW5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TREML1Q86YW5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TREML1Q86YW5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREML1Q86YW5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TREML1Q86YW5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREML1Q86YW5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREML1Q86YW5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREML1Q86YW5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREML1Q86YW5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TREML1Q86YW5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TREML1Q86YW5 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.35■□□□□ 0.53
TREML1Q86YW5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.35■□□□□ 0.53
TREML1Q86YW5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TREML1Q86YW5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TREML1Q86YW5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.35■□□□□ 0.53
TREML1Q86YW5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TREML1Q86YW5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TREML1Q86YW5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TREML1Q86YW5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TREML1Q86YW5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TREML1Q86YW5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.34■□□□□ 0.53
TREML1Q86YW5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.34■□□□□ 0.53
TREML1Q86YW5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.34■□□□□ 0.53
TREML1Q86YW5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREML1Q86YW5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TREML1Q86YW5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TREML1Q86YW5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TREML1Q86YW5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREML1Q86YW5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TREML1Q86YW5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TREML1Q86YW5 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.34■□□□□ 0.53
TREML1Q86YW5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREML1Q86YW5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREML1Q86YW5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREML1Q86YW5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.34■□□□□ 0.53
TREML1Q86YW5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREML1Q86YW5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREML1Q86YW5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TREML1Q86YW5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
TREML1Q86YW5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
TREML1Q86YW5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TREML1Q86YW5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TREML1Q86YW5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TREML1Q86YW5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TREML1Q86YW5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TREML1Q86YW5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TREML1Q86YW5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.33■□□□□ 0.53
TREML1Q86YW5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TREML1Q86YW5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.33■□□□□ 0.52
TREML1Q86YW5 AL499627.1-201ENST00000569373 2188 ntBASIC18.33■□□□□ 0.52
TREML1Q86YW5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.33■□□□□ 0.52
TREML1Q86YW5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TREML1Q86YW5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TREML1Q86YW5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.33■□□□□ 0.52
TREML1Q86YW5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.33■□□□□ 0.52
TREML1Q86YW5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.33■□□□□ 0.52
TREML1Q86YW5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TREML1Q86YW5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.33■□□□□ 0.52
TREML1Q86YW5 AC135776.1-201ENST00000319817 2481 ntBASIC18.33■□□□□ 0.52
TREML1Q86YW5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.33■□□□□ 0.52
TREML1Q86YW5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TREML1Q86YW5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
TREML1Q86YW5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TREML1Q86YW5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TREML1Q86YW5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.33■□□□□ 0.52
TREML1Q86YW5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TREML1Q86YW5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TREML1Q86YW5 AC124283.5-201ENST00000624661 1809 ntBASIC18.33■□□□□ 0.52
TREML1Q86YW5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TREML1Q86YW5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TREML1Q86YW5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.32■□□□□ 0.52
TREML1Q86YW5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TREML1Q86YW5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TREML1Q86YW5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.32■□□□□ 0.52
TREML1Q86YW5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TREML1Q86YW5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TREML1Q86YW5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TREML1Q86YW5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TREML1Q86YW5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TREML1Q86YW5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.32■□□□□ 0.52
TREML1Q86YW5 AC069236.1-201ENST00000604339 616 ntBASIC18.32■□□□□ 0.52
TREML1Q86YW5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TREML1Q86YW5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TREML1Q86YW5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TREML1Q86YW5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TREML1Q86YW5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.32■□□□□ 0.52
TREML1Q86YW5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TREML1Q86YW5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TREML1Q86YW5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TREML1Q86YW5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TREML1Q86YW5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.32■□□□□ 0.52
TREML1Q86YW5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TREML1Q86YW5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms