Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 AL121912.1-201ENST00000603683 238 ntBASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 AC125437.2-201ENST00000625180 2167 ntBASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 COX10-202ENST00000429152 875 ntTSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 AC092865.5-201ENST00000545435 363 ntBASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 AC079602.3-201ENST00000623931 403 ntBASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC11.7□□□□□ -0.54
VPS13BQ7Z7G8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 GPAT2P1-201ENST00000444924 1672 ntBASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 NME1-207ENST00000480143 964 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 GABARAPL3-202ENST00000624044 1851 ntBASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.69□□□□□ -0.54
VPS13BQ7Z7G8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms