Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 AL161938.1-201ENST00000569833 2180 ntBASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 KRT18P16-201ENST00000510337 1294 ntBASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 AC116562.4-202ENST00000641738 218 ntBASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 IER3-202ENST00000376377 1350 ntBASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF1Q7Z6J0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 SDHAP1-207ENST00000440850 2000 ntBASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 AC093503.3-201ENST00000624917 2352 ntBASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 AL121956.5-201ENST00000625261 221 ntBASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF1Q7Z6J0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 RCC2P6-201ENST00000526625 1557 ntBASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.71■■□□□ 1.07
SH3RF1Q7Z6J0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 MFAP1P1-201ENST00000442257 1255 ntBASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 AC011298.2-201ENST00000617989 482 ntBASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 AC141257.4-201ENST00000634557 245 ntBASIC21.7■■□□□ 1.06
SH3RF1Q7Z6J0 AC136944.6-201ENST00000634818 245 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms