Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC00575Q6W349 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00575Q6W349 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00575Q6W349 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00575Q6W349 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.02□□□□□ -0.48
LINC00575Q6W349 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC12.02□□□□□ -0.48
LINC00575Q6W349 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC12.02□□□□□ -0.48
LINC00575Q6W349 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00575Q6W349 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00575Q6W349 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00575Q6W349 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.02□□□□□ -0.48
LINC00575Q6W349 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00575Q6W349 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00575Q6W349 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.02□□□□□ -0.48
LINC00575Q6W349 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.02□□□□□ -0.48
LINC00575Q6W349 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 MCRIP2P1-201ENST00000394346 511 ntBASIC12.02□□□□□ -0.49
LINC00575Q6W349 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 MIR939-201ENST00000401314 82 ntBASIC12.02□□□□□ -0.49
LINC00575Q6W349 PBX2P1-201ENST00000493219 1291 ntBASIC12.02□□□□□ -0.49
LINC00575Q6W349 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 AC104417.2-201ENST00000562989 1793 ntBASIC12.02□□□□□ -0.49
LINC00575Q6W349 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00575Q6W349 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
LINC00575Q6W349 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 AC134043.2-201ENST00000624206 2238 ntBASIC12.01□□□□□ -0.49
LINC00575Q6W349 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 BRWD1-AS2-201ENST00000603064 1028 ntBASIC12.01□□□□□ -0.49
LINC00575Q6W349 AC105020.6-201ENST00000621523 1217 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms