Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASC1Q6TDU7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 FAM201B-201ENST00000458407 597 ntBASIC23.17■■□□□ 1.3
CASC1Q6TDU7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 AC233263.1-201ENST00000578059 224 ntBASIC23.17■■□□□ 1.3
CASC1Q6TDU7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.17■■□□□ 1.3
CASC1Q6TDU7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 AL512353.2-201ENST00000448759 1962 ntBASIC23.16■■□□□ 1.3
CASC1Q6TDU7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 TSPY20P-201ENST00000450910 630 ntBASIC23.16■■□□□ 1.3
CASC1Q6TDU7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 AL023875.1-201ENST00000640777 796 ntBASIC23.16■■□□□ 1.3
CASC1Q6TDU7 AC083906.6-201ENST00000641366 219 ntBASIC23.16■■□□□ 1.3
CASC1Q6TDU7 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.16■■□□□ 1.3
CASC1Q6TDU7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CASC1Q6TDU7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.15■■□□□ 1.3
CASC1Q6TDU7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 KRASP1-201ENST00000407852 552 ntBASIC23.15■■□□□ 1.3
CASC1Q6TDU7 KRT16P5-201ENST00000455284 522 ntBASIC23.15■■□□□ 1.3
CASC1Q6TDU7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 AC073648.6-201ENST00000641589 218 ntBASIC23.15■■□□□ 1.3
CASC1Q6TDU7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CASC1Q6TDU7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
CASC1Q6TDU7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
CASC1Q6TDU7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CASC1Q6TDU7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CASC1Q6TDU7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CASC1Q6TDU7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
CASC1Q6TDU7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.3
CASC1Q6TDU7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CASC1Q6TDU7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CASC1Q6TDU7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CASC1Q6TDU7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CASC1Q6TDU7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CASC1Q6TDU7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms