Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 MCCD1P1-208ENST00000445732 328 ntBASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.76□□□□□ -0.37
VPS13DQ5THJ4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 GABARAPL3-202ENST00000624044 1851 ntBASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 AC010240.3-201ENST00000607688 395 ntBASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 TREX1-205ENST00000625293 1783 ntBASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 AL022342.1-201ENST00000400363 863 ntBASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VPS13DQ5THJ4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 TCF3P1-201ENST00000423021 1937 ntBASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 AF238378.1-201ENST00000526806 358 ntBASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 MIR574-201ENST00000385209 96 ntBASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS13DQ5THJ4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13DQ5THJ4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms