Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABPB1Q06547 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GABPB1Q06547 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABPB1Q06547 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABPB1Q06547 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
GABPB1Q06547 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABPB1Q06547 LINC00602-201ENST00000629776 2065 ntBASIC19.44■□□□□ 0.7
GABPB1Q06547 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.43■□□□□ 0.7
GABPB1Q06547 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.43■□□□□ 0.7
GABPB1Q06547 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.43■□□□□ 0.7
GABPB1Q06547 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GABPB1Q06547 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.43■□□□□ 0.7
GABPB1Q06547 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.43■□□□□ 0.7
GABPB1Q06547 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABPB1Q06547 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPB1Q06547 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPB1Q06547 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPB1Q06547 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.42■□□□□ 0.7
GABPB1Q06547 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPB1Q06547 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
GABPB1Q06547 LINC00554-201ENST00000564841 3011 ntBASIC19.42■□□□□ 0.7
GABPB1Q06547 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GABPB1Q06547 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPB1Q06547 AC006455.2-201ENST00000429931 906 ntBASIC19.42■□□□□ 0.7
GABPB1Q06547 AC139795.1-202ENST00000500444 432 ntBASIC19.42■□□□□ 0.7
GABPB1Q06547 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPB1Q06547 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GABPB1Q06547 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
GABPB1Q06547 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPB1Q06547 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPB1Q06547 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.42■□□□□ 0.7
GABPB1Q06547 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
GABPB1Q06547 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPB1Q06547 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABPB1Q06547 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GABPB1Q06547 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABPB1Q06547 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.41■□□□□ 0.7
GABPB1Q06547 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABPB1Q06547 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABPB1Q06547 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
GABPB1Q06547 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
GABPB1Q06547 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABPB1Q06547 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.41■□□□□ 0.7
GABPB1Q06547 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABPB1Q06547 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.41■□□□□ 0.7
GABPB1Q06547 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABPB1Q06547 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABPB1Q06547 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABPB1Q06547 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.41■□□□□ 0.7
GABPB1Q06547 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GABPB1Q06547 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GABPB1Q06547 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.41■□□□□ 0.7
GABPB1Q06547 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GABPB1Q06547 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABPB1Q06547 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABPB1Q06547 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABPB1Q06547 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.41■□□□□ 0.7
GABPB1Q06547 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABPB1Q06547 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABPB1Q06547 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.4■□□□□ 0.7
GABPB1Q06547 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
GABPB1Q06547 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.4■□□□□ 0.7
GABPB1Q06547 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.4■□□□□ 0.7
GABPB1Q06547 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GABPB1Q06547 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.4■□□□□ 0.7
GABPB1Q06547 HSD17B1P1-201ENST00000590052 955 ntBASIC19.4■□□□□ 0.7
GABPB1Q06547 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.4■□□□□ 0.7
GABPB1Q06547 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.4■□□□□ 0.7
GABPB1Q06547 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GABPB1Q06547 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms