Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDKL1Q00532 HTR7P1-201ENST00000538670 1336 ntBASIC18.66■□□□□ 0.58
CDKL1Q00532 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
CDKL1Q00532 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKL1Q00532 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL1Q00532 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDKL1Q00532 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL1Q00532 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL1Q00532 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL1Q00532 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL1Q00532 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL1Q00532 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL1Q00532 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CDKL1Q00532 CROCCP3-202ENST00000420820 1947 ntBASIC18.65■□□□□ 0.58
CDKL1Q00532 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL1Q00532 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL1Q00532 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL1Q00532 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDKL1Q00532 KSR1P1-201ENST00000446298 240 ntBASIC18.65■□□□□ 0.58
CDKL1Q00532 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDKL1Q00532 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL1Q00532 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.65■□□□□ 0.58
CDKL1Q00532 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL1Q00532 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL1Q00532 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL1Q00532 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL1Q00532 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL1Q00532 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDKL1Q00532 AC009113.1-201ENST00000570267 2443 ntBASIC18.64■□□□□ 0.58
CDKL1Q00532 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CDKL1Q00532 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDKL1Q00532 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDKL1Q00532 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL1Q00532 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL1Q00532 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL1Q00532 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL1Q00532 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL1Q00532 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL1Q00532 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL1Q00532 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.64■□□□□ 0.57
CDKL1Q00532 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CDKL1Q00532 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL1Q00532 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.64■□□□□ 0.57
CDKL1Q00532 RARRES2P10-201ENST00000564312 460 ntBASIC18.64■□□□□ 0.57
CDKL1Q00532 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.64■□□□□ 0.57
CDKL1Q00532 AC131212.4-201ENST00000623606 975 ntBASIC18.64■□□□□ 0.57
CDKL1Q00532 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL1Q00532 PCDHB18P-201ENST00000524813 2368 ntBASIC18.64■□□□□ 0.57
CDKL1Q00532 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL1Q00532 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL1Q00532 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.64■□□□□ 0.57
CDKL1Q00532 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDKL1Q00532 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.64■□□□□ 0.57
CDKL1Q00532 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.64■□□□□ 0.57
CDKL1Q00532 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CDKL1Q00532 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL1Q00532 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKL1Q00532 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDKL1Q00532 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 AL133373.2-201ENST00000623187 2828 ntBASIC18.63■□□□□ 0.57
CDKL1Q00532 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CDKL1Q00532 AC004980.1-204ENST00000429707 299 ntBASIC18.63■□□□□ 0.57
CDKL1Q00532 TSPY23P-201ENST00000440136 739 ntBASIC18.63■□□□□ 0.57
CDKL1Q00532 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKL1Q00532 TSPY20P-201ENST00000450910 630 ntBASIC18.63■□□□□ 0.57
CDKL1Q00532 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKL1Q00532 AP002982.1-201ENST00000492365 877 ntBASIC18.63■□□□□ 0.57
CDKL1Q00532 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CDKL1Q00532 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.63■□□□□ 0.57
CDKL1Q00532 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKL1Q00532 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKL1Q00532 AL359736.2-201ENST00000621992 437 ntBASIC18.63■□□□□ 0.57
CDKL1Q00532 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.63■□□□□ 0.57
CDKL1Q00532 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL1Q00532 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKL1Q00532 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL1Q00532 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms