Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.88■□□□□ 0.77
CBX1P83916 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.88■□□□□ 0.77
CBX1P83916 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CBX1P83916 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CBX1P83916 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.88■□□□□ 0.77
CBX1P83916 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.88■□□□□ 0.77
CBX1P83916 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 OR2I1P-207ENST00000453522 948 ntBASIC19.88■□□□□ 0.77
CBX1P83916 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.88■□□□□ 0.77
CBX1P83916 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CBX1P83916 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CBX1P83916 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CBX1P83916 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBX1P83916 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CBX1P83916 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX1P83916 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX1P83916 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX1P83916 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CBX1P83916 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CBX1P83916 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.87■□□□□ 0.77
CBX1P83916 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBX1P83916 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX1P83916 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX1P83916 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX1P83916 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CBX1P83916 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.87■□□□□ 0.77
CBX1P83916 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBX1P83916 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX1P83916 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CBX1P83916 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CBX1P83916 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX1P83916 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX1P83916 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBX1P83916 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.87■□□□□ 0.77
CBX1P83916 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CBX1P83916 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.86■□□□□ 0.77
CBX1P83916 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.86■□□□□ 0.77
CBX1P83916 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.86■□□□□ 0.77
CBX1P83916 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CBX1P83916 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.86■□□□□ 0.77
CBX1P83916 ABHD17AP5-201ENST00000580133 923 ntBASIC19.86■□□□□ 0.77
CBX1P83916 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.86■□□□□ 0.77
CBX1P83916 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CBX1P83916 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 LINC02199-201ENST00000506655 2702 ntBASIC19.86■□□□□ 0.77
CBX1P83916 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBX1P83916 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.86■□□□□ 0.77
CBX1P83916 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.85■□□□□ 0.77
CBX1P83916 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.85■□□□□ 0.77
CBX1P83916 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
CBX1P83916 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.85■□□□□ 0.77
CBX1P83916 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.85■□□□□ 0.77
CBX1P83916 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.85■□□□□ 0.77
CBX1P83916 AC103724.3-201ENST00000564481 992 ntBASIC19.85■□□□□ 0.77
CBX1P83916 AC010525.1-201ENST00000585559 441 ntBASIC19.85■□□□□ 0.77
CBX1P83916 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.85■□□□□ 0.77
CBX1P83916 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.85■□□□□ 0.77
CBX1P83916 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.85■□□□□ 0.77
CBX1P83916 AC061975.6-201ENST00000579045 1553 ntBASIC19.85■□□□□ 0.77
CBX1P83916 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms