Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.7■□□□□ 0.58
SRP54P61011 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.7■□□□□ 0.58
SRP54P61011 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.7■□□□□ 0.58
SRP54P61011 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.7■□□□□ 0.58
SRP54P61011 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.7■□□□□ 0.58
SRP54P61011 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SRP54P61011 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 AC140113.3-201ENST00000605663 199 ntBASIC18.7■□□□□ 0.58
SRP54P61011 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.7■□□□□ 0.58
SRP54P61011 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.7■□□□□ 0.58
SRP54P61011 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SRP54P61011 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.7■□□□□ 0.58
SRP54P61011 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRP54P61011 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 AC125437.2-201ENST00000625180 2167 ntBASIC18.69■□□□□ 0.58
SRP54P61011 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SRP54P61011 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.69■□□□□ 0.58
SRP54P61011 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.69■□□□□ 0.58
SRP54P61011 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.69■□□□□ 0.58
SRP54P61011 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.69■□□□□ 0.58
SRP54P61011 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.69■□□□□ 0.58
SRP54P61011 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SRP54P61011 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SRP54P61011 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.69■□□□□ 0.58
SRP54P61011 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.69■□□□□ 0.58
SRP54P61011 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRP54P61011 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.68■□□□□ 0.58
SRP54P61011 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP54P61011 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.68■□□□□ 0.58
SRP54P61011 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP54P61011 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP54P61011 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP54P61011 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP54P61011 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.68■□□□□ 0.58
SRP54P61011 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.68■□□□□ 0.58
SRP54P61011 FAM8A6P-201ENST00000407496 1135 ntBASIC18.68■□□□□ 0.58
SRP54P61011 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.68■□□□□ 0.58
SRP54P61011 AC092647.4-201ENST00000457211 535 ntBASIC18.68■□□□□ 0.58
SRP54P61011 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRP54P61011 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.68■□□□□ 0.58
SRP54P61011 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.68■□□□□ 0.58
SRP54P61011 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.68■□□□□ 0.58
SRP54P61011 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SRP54P61011 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP54P61011 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.68■□□□□ 0.58
SRP54P61011 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SRP54P61011 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP54P61011 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRP54P61011 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRP54P61011 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRP54P61011 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRP54P61011 Z82202.1-201ENST00000623446 1880 ntBASIC18.67■□□□□ 0.58
SRP54P61011 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRP54P61011 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.67■□□□□ 0.58
SRP54P61011 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.67■□□□□ 0.58
SRP54P61011 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRP54P61011 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.67■□□□□ 0.58
SRP54P61011 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRP54P61011 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRP54P61011 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.67■□□□□ 0.58
SRP54P61011 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.67■□□□□ 0.58
SRP54P61011 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SRP54P61011 AL023973.1-201ENST00000624619 620 ntBASIC18.67■□□□□ 0.58
SRP54P61011 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
SRP54P61011 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
SRP54P61011 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRP54P61011 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRP54P61011 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRP54P61011 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRP54P61011 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SRP54P61011 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.67■□□□□ 0.58
SRP54P61011 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRP54P61011 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.67■□□□□ 0.58
SRP54P61011 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.67■□□□□ 0.58
SRP54P61011 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.67■□□□□ 0.58
SRP54P61011 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SRP54P61011 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRP54P61011 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms