Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SEC61GP60059 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SEC61GP60059 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
SEC61GP60059 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC10.55□□□□□ -0.72
SEC61GP60059 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SEC61GP60059 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SEC61GP60059 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SEC61GP60059 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SEC61GP60059 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SEC61GP60059 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SEC61GP60059 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SEC61GP60059 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
SEC61GP60059 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
SEC61GP60059 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
SEC61GP60059 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SEC61GP60059 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SEC61GP60059 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SEC61GP60059 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SEC61GP60059 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC10.54□□□□□ -0.72
SEC61GP60059 PCDHB17P-201ENST00000539533 2393 ntBASIC10.54□□□□□ -0.72
SEC61GP60059 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
SEC61GP60059 SON-203ENST00000381679 7860 ntTSL 5 BASIC10.54□□□□□ -0.72
SEC61GP60059 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC10.54□□□□□ -0.72
SEC61GP60059 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SEC61GP60059 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SEC61GP60059 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 PFN2-211ENST00000489155 636 ntTSL 4 BASIC10.54□□□□□ -0.72
SEC61GP60059 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC10.54□□□□□ -0.72
SEC61GP60059 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC10.54□□□□□ -0.72
SEC61GP60059 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC10.54□□□□□ -0.72
SEC61GP60059 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SEC61GP60059 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SEC61GP60059 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC10.54□□□□□ -0.72
SEC61GP60059 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SEC61GP60059 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SEC61GP60059 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC10.54□□□□□ -0.72
SEC61GP60059 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SEC61GP60059 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC10.54□□□□□ -0.72
SEC61GP60059 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
SEC61GP60059 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SEC61GP60059 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 ACE-204ENST00000428043 5120 ntTSL 2 BASIC10.54□□□□□ -0.72
SEC61GP60059 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
SEC61GP60059 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SEC61GP60059 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC10.53□□□□□ -0.72
SEC61GP60059 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC10.53□□□□□ -0.72
SEC61GP60059 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC10.53□□□□□ -0.72
SEC61GP60059 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SEC61GP60059 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC10.53□□□□□ -0.72
SEC61GP60059 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC10.53□□□□□ -0.72
SEC61GP60059 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SEC61GP60059 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 ME2-216ENST00000639850 2331 ntTSL 5 BASIC10.53□□□□□ -0.72
SEC61GP60059 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SEC61GP60059 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms