Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 AC060766.5-201ENST00000590539 871 ntBASIC17.5■□□□□ 0.39
SMIM11AP58511 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.5■□□□□ 0.39
SMIM11AP58511 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SMIM11AP58511 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.5■□□□□ 0.39
SMIM11AP58511 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.5■□□□□ 0.39
SMIM11AP58511 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SMIM11AP58511 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.5■□□□□ 0.39
SMIM11AP58511 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMIM11AP58511 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMIM11AP58511 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.49■□□□□ 0.39
SMIM11AP58511 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMIM11AP58511 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMIM11AP58511 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.49■□□□□ 0.39
SMIM11AP58511 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMIM11AP58511 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SMIM11AP58511 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.49■□□□□ 0.39
SMIM11AP58511 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.49■□□□□ 0.39
SMIM11AP58511 PNMA6B-201ENST00000538162 1200 ntBASIC17.49■□□□□ 0.39
SMIM11AP58511 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.49■□□□□ 0.39
SMIM11AP58511 AL137784.2-201ENST00000607332 1000 ntBASIC17.49■□□□□ 0.39
SMIM11AP58511 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.49■□□□□ 0.39
SMIM11AP58511 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMIM11AP58511 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMIM11AP58511 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SMIM11AP58511 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.48■□□□□ 0.39
SMIM11AP58511 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SMIM11AP58511 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 AC007613.1-201ENST00000572811 2597 ntBASIC17.48■□□□□ 0.39
SMIM11AP58511 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.48■□□□□ 0.39
SMIM11AP58511 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.48■□□□□ 0.39
SMIM11AP58511 AC006970.2-201ENST00000450065 779 ntBASIC17.48■□□□□ 0.39
SMIM11AP58511 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.48■□□□□ 0.39
SMIM11AP58511 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.48■□□□□ 0.39
SMIM11AP58511 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.48■□□□□ 0.39
SMIM11AP58511 AC092437.1-201ENST00000624794 1048 ntBASIC17.48■□□□□ 0.39
SMIM11AP58511 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.48■□□□□ 0.39
SMIM11AP58511 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.48■□□□□ 0.39
SMIM11AP58511 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SMIM11AP58511 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.48■□□□□ 0.39
SMIM11AP58511 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.48■□□□□ 0.39
SMIM11AP58511 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SMIM11AP58511 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SMIM11AP58511 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SMIM11AP58511 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 AL354751.1-201ENST00000412768 1863 ntBASIC17.48■□□□□ 0.39
SMIM11AP58511 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
SMIM11AP58511 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SMIM11AP58511 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM11AP58511 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.47■□□□□ 0.39
SMIM11AP58511 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM11AP58511 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM11AP58511 CROCCP5-201ENST00000436658 830 ntBASIC17.47■□□□□ 0.39
SMIM11AP58511 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.47■□□□□ 0.39
SMIM11AP58511 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM11AP58511 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM11AP58511 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SMIM11AP58511 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.47■□□□□ 0.39
SMIM11AP58511 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms