Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN8P56748 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN8P56748 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN8P56748 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN8P56748 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN8P56748 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN8P56748 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.05■□□□□ 0.48
CLDN8P56748 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CLDN8P56748 HLA-L-209ENST00000420110 1011 ntBASIC18.05■□□□□ 0.48
CLDN8P56748 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.05■□□□□ 0.48
CLDN8P56748 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN8P56748 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLDN8P56748 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
CLDN8P56748 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN8P56748 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.05■□□□□ 0.48
CLDN8P56748 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN8P56748 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN8P56748 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN8P56748 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN8P56748 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN8P56748 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN8P56748 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN8P56748 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLDN8P56748 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.05■□□□□ 0.48
CLDN8P56748 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN8P56748 AC007613.1-201ENST00000572811 2597 ntBASIC18.04■□□□□ 0.48
CLDN8P56748 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN8P56748 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN8P56748 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLDN8P56748 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 KRT16P5-201ENST00000455284 522 ntBASIC18.04■□□□□ 0.48
CLDN8P56748 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 Z85996.1-201ENST00000494644 937 ntBASIC18.04■□□□□ 0.48
CLDN8P56748 RNA5SP413-201ENST00000516373 109 ntBASIC18.04■□□□□ 0.48
CLDN8P56748 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN8P56748 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 AC233263.1-201ENST00000578059 224 ntBASIC18.04■□□□□ 0.48
CLDN8P56748 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN8P56748 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLDN8P56748 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN8P56748 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN8P56748 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN8P56748 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN8P56748 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLDN8P56748 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLDN8P56748 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN8P56748 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN8P56748 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN8P56748 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN8P56748 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLDN8P56748 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN8P56748 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLDN8P56748 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN8P56748 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN8P56748 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLDN8P56748 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN8P56748 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN8P56748 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.02■□□□□ 0.48
CLDN8P56748 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN8P56748 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN8P56748 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN8P56748 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN8P56748 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN8P56748 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN8P56748 KRASP1-201ENST00000407852 552 ntBASIC18.02■□□□□ 0.48
CLDN8P56748 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN8P56748 POU5F1P3-201ENST00000428824 1078 ntBASIC18.02■□□□□ 0.48
CLDN8P56748 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN8P56748 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN8P56748 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN8P56748 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN8P56748 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CLDN8P56748 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms