Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.29■□□□□ 0.84
VCPP55072 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VCPP55072 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.29■□□□□ 0.84
VCPP55072 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VCPP55072 FSCN1P1-201ENST00000568912 1481 ntBASIC20.29■□□□□ 0.84
VCPP55072 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
VCPP55072 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
VCPP55072 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.29■□□□□ 0.84
VCPP55072 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.28■□□□□ 0.84
VCPP55072 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.28■□□□□ 0.84
VCPP55072 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
VCPP55072 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.28■□□□□ 0.84
VCPP55072 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
VCPP55072 TNXA-203ENST00000507684 2038 ntBASIC20.28■□□□□ 0.84
VCPP55072 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 YBX1P10-201ENST00000444752 975 ntBASIC20.28■□□□□ 0.84
VCPP55072 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.28■□□□□ 0.84
VCPP55072 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.28■□□□□ 0.84
VCPP55072 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.28■□□□□ 0.84
VCPP55072 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.28■□□□□ 0.84
VCPP55072 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.28■□□□□ 0.84
VCPP55072 AL138966.2-201ENST00000621997 464 ntBASIC20.28■□□□□ 0.84
VCPP55072 AC012313.10-201ENST00000623509 926 ntBASIC20.28■□□□□ 0.84
VCPP55072 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
VCPP55072 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
VCPP55072 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
VCPP55072 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.28■□□□□ 0.84
VCPP55072 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.28■□□□□ 0.84
VCPP55072 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCPP55072 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.27■□□□□ 0.84
VCPP55072 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCPP55072 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VCPP55072 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCPP55072 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VCPP55072 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCPP55072 AL020996.1-203ENST00000536896 2307 ntBASIC20.27■□□□□ 0.84
VCPP55072 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCPP55072 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCPP55072 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCPP55072 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCPP55072 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCPP55072 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.27■□□□□ 0.84
VCPP55072 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.27■□□□□ 0.84
VCPP55072 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.27■□□□□ 0.84
VCPP55072 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.27■□□□□ 0.84
VCPP55072 C1QL1P1-201ENST00000568105 661 ntBASIC20.27■□□□□ 0.84
VCPP55072 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCPP55072 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VCPP55072 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCPP55072 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
VCPP55072 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
VCPP55072 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VCPP55072 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
VCPP55072 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VCPP55072 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
VCPP55072 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.26■□□□□ 0.83
VCPP55072 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.26■□□□□ 0.83
VCPP55072 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.26■□□□□ 0.83
VCPP55072 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCPP55072 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VCPP55072 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCPP55072 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCPP55072 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VCPP55072 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.26■□□□□ 0.83
VCPP55072 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCPP55072 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.26■□□□□ 0.83
VCPP55072 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCPP55072 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCPP55072 AC246785.2-201ENST00000432512 513 ntBASIC20.26■□□□□ 0.83
VCPP55072 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.26■□□□□ 0.83
VCPP55072 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.26■□□□□ 0.83
VCPP55072 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.26■□□□□ 0.83
VCPP55072 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.26■□□□□ 0.83
VCPP55072 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.26■□□□□ 0.83
VCPP55072 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.26■□□□□ 0.83
VCPP55072 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCPP55072 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.26■□□□□ 0.83
VCPP55072 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.26■□□□□ 0.83
VCPP55072 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCPP55072 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VCPP55072 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VCPP55072 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
VCPP55072 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCPP55072 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
VCPP55072 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
VCPP55072 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.25■□□□□ 0.83
VCPP55072 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCPP55072 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms