Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.94■□□□□ 0.46
NR1H2P55055 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NR1H2P55055 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.94■□□□□ 0.46
NR1H2P55055 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NR1H2P55055 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.94■□□□□ 0.46
NR1H2P55055 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H2P55055 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.93■□□□□ 0.46
NR1H2P55055 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.93■□□□□ 0.46
NR1H2P55055 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.93■□□□□ 0.46
NR1H2P55055 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
NR1H2P55055 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
NR1H2P55055 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.93■□□□□ 0.46
NR1H2P55055 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NR1H2P55055 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.93■□□□□ 0.46
NR1H2P55055 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.93■□□□□ 0.46
NR1H2P55055 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.93■□□□□ 0.46
NR1H2P55055 AC007322.3-201ENST00000426526 701 ntBASIC17.93■□□□□ 0.46
NR1H2P55055 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.93■□□□□ 0.46
NR1H2P55055 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.93■□□□□ 0.46
NR1H2P55055 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.93■□□□□ 0.46
NR1H2P55055 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 CYP2T3P-201ENST00000601990 817 ntBASIC17.93■□□□□ 0.46
NR1H2P55055 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NR1H2P55055 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
NR1H2P55055 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.93■□□□□ 0.46
NR1H2P55055 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NR1H2P55055 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
NR1H2P55055 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
NR1H2P55055 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NR1H2P55055 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.92■□□□□ 0.46
NR1H2P55055 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 ESRRAP1-201ENST00000400596 1257 ntBASIC17.92■□□□□ 0.46
NR1H2P55055 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.92■□□□□ 0.46
NR1H2P55055 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.92■□□□□ 0.46
NR1H2P55055 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.92■□□□□ 0.46
NR1H2P55055 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.92■□□□□ 0.46
NR1H2P55055 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.92■□□□□ 0.46
NR1H2P55055 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.92■□□□□ 0.46
NR1H2P55055 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.92■□□□□ 0.46
NR1H2P55055 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.92■□□□□ 0.46
NR1H2P55055 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.92■□□□□ 0.46
NR1H2P55055 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NR1H2P55055 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NR1H2P55055 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR1H2P55055 SIRPAP1-201ENST00000448467 1770 ntBASIC17.91■□□□□ 0.46
NR1H2P55055 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
NR1H2P55055 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.91■□□□□ 0.46
NR1H2P55055 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR1H2P55055 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NR1H2P55055 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms